Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Gm9061-201ENSMUST00000182707 1006 ntBASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Gm27552-201ENSMUST00000183351 62 ntBASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Gm27844-201ENSMUST00000183613 62 ntBASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Gm45495-201ENSMUST00000200940 1700 ntBASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Gm24749-201ENSMUST00000157838 343 ntBASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Gm7003-201ENSMUST00000195089 312 ntBASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Gm45770-201ENSMUST00000212105 616 ntBASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hfm1D3Z4R1 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Gm37201-201ENSMUST00000191845 523 ntBASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Gm18393-201ENSMUST00000208349 1131 ntBASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hfm1D3Z4R1 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Gm37666-201ENSMUST00000194110 866 ntBASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Gm44651-201ENSMUST00000207343 372 ntBASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Gm45118-201ENSMUST00000208928 825 ntBASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms