Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Gm27847-201ENSMUST00000183711 107 ntBASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Gm27375-201ENSMUST00000183799 107 ntBASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Gm6091-201ENSMUST00000098307 165 ntBASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmf1B9EKI3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Gm30238-201ENSMUST00000195528 2603 ntBASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Gm12390-201ENSMUST00000117897 397 ntBASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Gm8810-201ENSMUST00000172895 754 ntBASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Gm44064-201ENSMUST00000204964 1087 ntBASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Gm45331-201ENSMUST00000209868 554 ntBASIC18.17■□□□□ 0.5
Tmf1B9EKI3 AC134335.2-201ENSMUST00000227660 440 ntBASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tmf1B9EKI3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Tmf1B9EKI3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms