Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Usp42B2RQC2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.72■□□□□ 0.11
Usp42B2RQC2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.72■□□□□ 0.11
Usp42B2RQC2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Usp42B2RQC2 Gm18473-201ENSMUST00000220543 868 ntBASIC15.72■□□□□ 0.11
Usp42B2RQC2 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.72■□□□□ 0.11
Usp42B2RQC2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp42B2RQC2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp42B2RQC2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp42B2RQC2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp42B2RQC2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Usp42B2RQC2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp42B2RQC2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Usp42B2RQC2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp42B2RQC2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp42B2RQC2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp42B2RQC2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp42B2RQC2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Usp42B2RQC2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp42B2RQC2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp42B2RQC2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Gm6152-201ENSMUST00000151704 340 ntBASIC15.71■□□□□ 0.11
Usp42B2RQC2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Mir7221-201ENSMUST00000184009 72 ntBASIC15.71■□□□□ 0.11
Usp42B2RQC2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp42B2RQC2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.71■□□□□ 0.11
Usp42B2RQC2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp42B2RQC2 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.71■□□□□ 0.11
Usp42B2RQC2 Itm2b-204ENSMUST00000228637 783 ntBASIC15.71■□□□□ 0.11
Usp42B2RQC2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp42B2RQC2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.71■□□□□ 0.11
Usp42B2RQC2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp42B2RQC2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Usp42B2RQC2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.7■□□□□ 0.1
Usp42B2RQC2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.7■□□□□ 0.1
Usp42B2RQC2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp42B2RQC2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.69■□□□□ 0.1
Usp42B2RQC2 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.69■□□□□ 0.1
Usp42B2RQC2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Gm7287-201ENSMUST00000205267 602 ntBASIC15.69■□□□□ 0.1
Usp42B2RQC2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms