Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Gm43823-201ENSMUST00000197391 1808 ntBASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Gm14832-201ENSMUST00000121289 322 ntBASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn7aB1AYL1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn7aB1AYL1 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn7aB1AYL1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.96■□□□□ 0.31
Scn7aB1AYL1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn7aB1AYL1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Scn7aB1AYL1 Gm12176-201ENSMUST00000121420 875 ntBASIC16.96■□□□□ 0.31
Scn7aB1AYL1 Gm13394-201ENSMUST00000121658 1000 ntBASIC16.96■□□□□ 0.31
Scn7aB1AYL1 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Scn7aB1AYL1 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.96■□□□□ 0.31
Scn7aB1AYL1 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Scn7aB1AYL1 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn7aB1AYL1 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Scn7aB1AYL1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Scn7aB1AYL1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Gm8385-201ENSMUST00000058999 643 ntBASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn7aB1AYL1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Gm14921-201ENSMUST00000118643 908 ntBASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Gm24749-201ENSMUST00000157838 343 ntBASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Gm8494-201ENSMUST00000178171 1233 ntBASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Gm8913-201ENSMUST00000209491 641 ntBASIC16.94■□□□□ 0.3
Scn7aB1AYL1 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Gm10702-201ENSMUST00000098929 1268 ntBASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn7aB1AYL1 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms