Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm22065-201ENSMUST00000103753 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm22066-201ENSMUST00000103761 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm24932-201ENSMUST00000103763 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm24115-201ENSMUST00000103799 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm22190-201ENSMUST00000103827 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm22191-201ENSMUST00000103831 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm24721-201ENSMUST00000103849 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm28018-201ENSMUST00000103869 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm26399-201ENSMUST00000103937 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm6912-201ENSMUST00000117218 544 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm25349-201ENSMUST00000177728 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm23616-201ENSMUST00000177797 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm25871-201ENSMUST00000177816 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm24752-201ENSMUST00000178240 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm24496-201ENSMUST00000178287 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm25649-201ENSMUST00000178476 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm25548-201ENSMUST00000178681 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm23147-201ENSMUST00000178841 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm26095-201ENSMUST00000179270 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm22171-201ENSMUST00000179283 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm23936-201ENSMUST00000179354 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm22619-201ENSMUST00000179516 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm25255-201ENSMUST00000179579 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm24755-201ENSMUST00000179691 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm26506-201ENSMUST00000179692 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm25086-201ENSMUST00000179931 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm23243-201ENSMUST00000180047 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm24659-201ENSMUST00000180212 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm24169-201ENSMUST00000180244 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm23689-201ENSMUST00000180354 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Mir7221-201ENSMUST00000184009 72 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm27359-201ENSMUST00000184153 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm27785-201ENSMUST00000184268 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm27466-201ENSMUST00000184396 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm27703-201ENSMUST00000184836 110 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm18206-201ENSMUST00000207027 926 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gm9229-201ENSMUST00000222777 126 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Rubie-203ENSMUST00000227803 2430 ntBASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms