Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 AC131187.1-201ENSMUST00000224567 809 ntBASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav6n-6A0A075B6B2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm22065-201ENSMUST00000103753 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm22066-201ENSMUST00000103761 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm24932-201ENSMUST00000103763 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm24115-201ENSMUST00000103799 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm22190-201ENSMUST00000103827 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm22191-201ENSMUST00000103831 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm24721-201ENSMUST00000103849 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm28018-201ENSMUST00000103869 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm26399-201ENSMUST00000103937 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm25349-201ENSMUST00000177728 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm23616-201ENSMUST00000177797 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm25871-201ENSMUST00000177816 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm24752-201ENSMUST00000178240 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm24496-201ENSMUST00000178287 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm25649-201ENSMUST00000178476 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm25548-201ENSMUST00000178681 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm23147-201ENSMUST00000178841 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm26095-201ENSMUST00000179270 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm22171-201ENSMUST00000179283 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm23936-201ENSMUST00000179354 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm22619-201ENSMUST00000179516 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm25255-201ENSMUST00000179579 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm24755-201ENSMUST00000179691 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm26506-201ENSMUST00000179692 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm25086-201ENSMUST00000179931 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm23243-201ENSMUST00000180047 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm24659-201ENSMUST00000180212 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm24169-201ENSMUST00000180244 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm23689-201ENSMUST00000180354 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm27359-201ENSMUST00000184153 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm27785-201ENSMUST00000184268 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm27466-201ENSMUST00000184396 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm27703-201ENSMUST00000184836 110 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms