Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm44344-201ENSMUST00000200287 129 ntBASIC11.05□□□□□ -0.64
Trav18A0A075B656 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.05□□□□□ -0.64
Trav18A0A075B656 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.04□□□□□ -0.64
Trav18A0A075B656 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Gm15770-201ENSMUST00000117498 584 ntBASIC11.04□□□□□ -0.64
Trav18A0A075B656 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.04□□□□□ -0.64
Trav18A0A075B656 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Gm43703-201ENSMUST00000200523 763 ntBASIC11.04□□□□□ -0.64
Trav18A0A075B656 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Gm8396-201ENSMUST00000057361 823 ntBASIC11.04□□□□□ -0.64
Trav18A0A075B656 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.04□□□□□ -0.64
Trav18A0A075B656 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.04□□□□□ -0.64
Trav18A0A075B656 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav18A0A075B656 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.03□□□□□ -0.64
Trav18A0A075B656 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Gm6736-201ENSMUST00000166583 948 ntBASIC11.03□□□□□ -0.64
Trav18A0A075B656 Gm24420-201ENSMUST00000176676 59 ntBASIC11.03□□□□□ -0.64
Trav18A0A075B656 Gm3436-201ENSMUST00000179930 840 ntBASIC11.03□□□□□ -0.64
Trav18A0A075B656 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Gm27618-201ENSMUST00000183671 60 ntBASIC11.03□□□□□ -0.64
Trav18A0A075B656 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Gm6888-201ENSMUST00000221983 706 ntBASIC11.03□□□□□ -0.64
Trav18A0A075B656 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms