Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Gm10327-201ENSMUST00000105222 1002 ntBASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Gm5682-201ENSMUST00000173402 505 ntBASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Gm8597-201ENSMUST00000191525 1109 ntBASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Gm5069-202ENSMUST00000192714 1011 ntBASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Gm18669-201ENSMUST00000216049 778 ntBASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Gm43075-201ENSMUST00000198613 3905 ntBASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Gm13722-201ENSMUST00000117964 3066 ntBASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Gm25990-201ENSMUST00000102440 86 ntBASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Gm11764-201ENSMUST00000120221 623 ntBASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Gm37230-201ENSMUST00000194491 818 ntBASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 AC131690.1-201ENSMUST00000218406 374 ntBASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms