Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip2Q9Z0H8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clip2Q9Z0H8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip2Q9Z0H8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip2Q9Z0H8 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Clip2Q9Z0H8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.68■□□□□ 0.1
Clip2Q9Z0H8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.68■□□□□ 0.1
Clip2Q9Z0H8 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Clip2Q9Z0H8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Gm7561-201ENSMUST00000211203 886 ntBASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip2Q9Z0H8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Gm8598-201ENSMUST00000221184 836 ntBASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Gm6091-201ENSMUST00000098307 165 ntBASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip2Q9Z0H8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Clip2Q9Z0H8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip2Q9Z0H8 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clip2Q9Z0H8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip2Q9Z0H8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clip2Q9Z0H8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip2Q9Z0H8 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.65■□□□□ 0.1
Clip2Q9Z0H8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Clip2Q9Z0H8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clip2Q9Z0H8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.65■□□□□ 0.1
Clip2Q9Z0H8 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.65■□□□□ 0.1
Clip2Q9Z0H8 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.65■□□□□ 0.1
Clip2Q9Z0H8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.65■□□□□ 0.1
Clip2Q9Z0H8 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.65■□□□□ 0.1
Clip2Q9Z0H8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.65■□□□□ 0.1
Clip2Q9Z0H8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip2Q9Z0H8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms