Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CcsQ9WU84 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.48□□□□□ -0.73
CcsQ9WU84 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Gm20553-201ENSMUST00000204205 844 ntBASIC10.48□□□□□ -0.73
CcsQ9WU84 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC10.48□□□□□ -0.73
CcsQ9WU84 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 CT025555.1-201ENSMUST00000225901 1217 ntBASIC10.48□□□□□ -0.73
CcsQ9WU84 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.48□□□□□ -0.73
CcsQ9WU84 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC10.48□□□□□ -0.73
CcsQ9WU84 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
CcsQ9WU84 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.47□□□□□ -0.73
CcsQ9WU84 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Gm16026-204ENSMUST00000162652 683 ntBASIC10.47□□□□□ -0.73
CcsQ9WU84 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Gm18737-201ENSMUST00000173594 937 ntBASIC10.47□□□□□ -0.73
CcsQ9WU84 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CcsQ9WU84 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC10.47□□□□□ -0.73
CcsQ9WU84 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.47□□□□□ -0.73
CcsQ9WU84 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.47□□□□□ -0.73
CcsQ9WU84 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CcsQ9WU84 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
CcsQ9WU84 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CcsQ9WU84 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CcsQ9WU84 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
CcsQ9WU84 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
CcsQ9WU84 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
CcsQ9WU84 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CcsQ9WU84 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.46□□□□□ -0.73
CcsQ9WU84 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CcsQ9WU84 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CcsQ9WU84 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CcsQ9WU84 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CcsQ9WU84 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CcsQ9WU84 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CcsQ9WU84 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CcsQ9WU84 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
CcsQ9WU84 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CcsQ9WU84 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CcsQ9WU84 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms