Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Gm14208-201ENSMUST00000119645 678 ntBASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Gm2445-201ENSMUST00000182798 989 ntBASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-4Q9EQM3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Gm12502-201ENSMUST00000120197 444 ntBASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Gm43378-201ENSMUST00000199336 582 ntBASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-4Q9EQM3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Gm28450-201ENSMUST00000187349 638 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms