Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Olfr284-202ENSMUST00000206647 966 ntBASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Rassf8-202ENSMUST00000058538 1131 ntBASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 CT009713.10-201ENSMUST00000225013 1986 ntBASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 AC154171.1-201ENSMUST00000224610 643 ntBASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Gm6203-201ENSMUST00000209575 1342 ntBASIC18.36■□□□□ 0.53
Cpsf1Q9EPU4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Mir874-201ENSMUST00000104769 76 ntBASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Gm12291-201ENSMUST00000121627 311 ntBASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf1Q9EPU4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Gm30238-201ENSMUST00000195528 2603 ntBASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Gm7809-201ENSMUST00000153199 742 ntBASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Gm26185-201ENSMUST00000157692 266 ntBASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Gm16379-201ENSMUST00000161469 348 ntBASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Gm8762-201ENSMUST00000193486 339 ntBASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf1Q9EPU4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf1Q9EPU4 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cpsf1Q9EPU4 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms