Protein–RNA interactions for Protein: Q9DBT3

Ccdc97, Coiled-coil domain-containing protein 97, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc97Q9DBT3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Gm33320-201ENSMUST00000192232 530 ntBASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Gm46209-201ENSMUST00000217912 553 ntBASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc97Q9DBT3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Gm6888-201ENSMUST00000221983 706 ntBASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc97Q9DBT3 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Gm17837-201ENSMUST00000186435 985 ntBASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Gm9229-201ENSMUST00000222777 126 ntBASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc97Q9DBT3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc97Q9DBT3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc97Q9DBT3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccdc97Q9DBT3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc97Q9DBT3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms