Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Gm18307-201ENSMUST00000206864 949 ntBASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Gm6180-201ENSMUST00000065243 498 ntBASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2aQ9DB34 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp2aQ9DB34 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Gm26464-201ENSMUST00000157094 305 ntBASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Gm8515-201ENSMUST00000194852 576 ntBASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Gm18018-201ENSMUST00000198273 408 ntBASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Gm45668-201ENSMUST00000211271 493 ntBASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Gm9908-201ENSMUST00000211534 448 ntBASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms