Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
U2af1Q9D883 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.71■□□□□ 0.43
U2af1Q9D883 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
U2af1Q9D883 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC17.71■□□□□ 0.43
U2af1Q9D883 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
U2af1Q9D883 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
U2af1Q9D883 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
U2af1Q9D883 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
U2af1Q9D883 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
U2af1Q9D883 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
U2af1Q9D883 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
U2af1Q9D883 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
U2af1Q9D883 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.71■□□□□ 0.43
U2af1Q9D883 Ksr1-207ENSMUST00000226282 5260 ntBASIC17.71■□□□□ 0.43
U2af1Q9D883 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
U2af1Q9D883 Gm43273-201ENSMUST00000199649 2594 ntBASIC17.71■□□□□ 0.43
U2af1Q9D883 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
U2af1Q9D883 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
U2af1Q9D883 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC17.71■□□□□ 0.42
U2af1Q9D883 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
U2af1Q9D883 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
U2af1Q9D883 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2af1Q9D883 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2af1Q9D883 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2af1Q9D883 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
U2af1Q9D883 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2af1Q9D883 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2af1Q9D883 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
U2af1Q9D883 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC17.7■□□□□ 0.42
U2af1Q9D883 Gm14127-201ENSMUST00000117906 678 ntBASIC17.7■□□□□ 0.42
U2af1Q9D883 Mup-ps23-201ENSMUST00000118063 630 ntBASIC17.7■□□□□ 0.42
U2af1Q9D883 Gm13829-201ENSMUST00000119600 138 ntBASIC17.7■□□□□ 0.42
U2af1Q9D883 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC17.7■□□□□ 0.42
U2af1Q9D883 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
U2af1Q9D883 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.7■□□□□ 0.42
U2af1Q9D883 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2af1Q9D883 Gm6266-201ENSMUST00000203844 806 ntBASIC17.7■□□□□ 0.42
U2af1Q9D883 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2af1Q9D883 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2af1Q9D883 Gm10012-201ENSMUST00000078252 192 ntBASIC17.7■□□□□ 0.42
U2af1Q9D883 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2af1Q9D883 Gm30238-201ENSMUST00000195528 2603 ntBASIC17.7■□□□□ 0.42
U2af1Q9D883 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
U2af1Q9D883 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2af1Q9D883 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC17.7■□□□□ 0.42
U2af1Q9D883 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2af1Q9D883 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
U2af1Q9D883 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2af1Q9D883 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2af1Q9D883 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2af1Q9D883 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2af1Q9D883 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2af1Q9D883 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
U2af1Q9D883 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
U2af1Q9D883 Gm14752-201ENSMUST00000120719 2075 ntBASIC17.69■□□□□ 0.42
U2af1Q9D883 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
U2af1Q9D883 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2af1Q9D883 Gm4984-201ENSMUST00000115987 360 ntBASIC17.69■□□□□ 0.42
U2af1Q9D883 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2af1Q9D883 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.69■□□□□ 0.42
U2af1Q9D883 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.69■□□□□ 0.42
U2af1Q9D883 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.69■□□□□ 0.42
U2af1Q9D883 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.69■□□□□ 0.42
U2af1Q9D883 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.69■□□□□ 0.42
U2af1Q9D883 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.69■□□□□ 0.42
U2af1Q9D883 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2af1Q9D883 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2af1Q9D883 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
U2af1Q9D883 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
U2af1Q9D883 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
U2af1Q9D883 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
U2af1Q9D883 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2af1Q9D883 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2af1Q9D883 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
U2af1Q9D883 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.69■□□□□ 0.42
U2af1Q9D883 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
U2af1Q9D883 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
U2af1Q9D883 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
U2af1Q9D883 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
U2af1Q9D883 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
U2af1Q9D883 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
U2af1Q9D883 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
U2af1Q9D883 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
U2af1Q9D883 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
U2af1Q9D883 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
U2af1Q9D883 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.68■□□□□ 0.42
U2af1Q9D883 Gm7561-201ENSMUST00000211203 886 ntBASIC17.68■□□□□ 0.42
U2af1Q9D883 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
U2af1Q9D883 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
U2af1Q9D883 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
U2af1Q9D883 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
U2af1Q9D883 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC17.68■□□□□ 0.42
U2af1Q9D883 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
U2af1Q9D883 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
U2af1Q9D883 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
U2af1Q9D883 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC17.68■□□□□ 0.42
U2af1Q9D883 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.68■□□□□ 0.42
U2af1Q9D883 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
U2af1Q9D883 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
U2af1Q9D883 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms