Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim42Q9D2H5 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Gm18733-201ENSMUST00000173950 856 ntBASIC13.48□□□□□ -0.25
Trim42Q9D2H5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Gm18027-201ENSMUST00000218947 619 ntBASIC13.48□□□□□ -0.25
Trim42Q9D2H5 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 BC001981-202ENSMUST00000191393 1545 ntBASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.48□□□□□ -0.25
Trim42Q9D2H5 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim42Q9D2H5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms