Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Gm13829-201ENSMUST00000119600 138 ntBASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Gm27486-201ENSMUST00000184923 80 ntBASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Gm43433-201ENSMUST00000196573 481 ntBASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.39□□□□□ -0.43
Rita1Q9D1H0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rita1Q9D1H0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Gm6447-201ENSMUST00000118905 835 ntBASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Gm11814-201ENSMUST00000119515 929 ntBASIC12.38□□□□□ -0.43
Rita1Q9D1H0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Gm24196-201ENSMUST00000179161 110 ntBASIC12.38□□□□□ -0.43
Rita1Q9D1H0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Gm25857-201ENSMUST00000082788 129 ntBASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rita1Q9D1H0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rita1Q9D1H0 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.37□□□□□ -0.43
Rita1Q9D1H0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rita1Q9D1H0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rita1Q9D1H0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rita1Q9D1H0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rita1Q9D1H0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rita1Q9D1H0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rita1Q9D1H0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rita1Q9D1H0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rita1Q9D1H0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rita1Q9D1H0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rita1Q9D1H0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rita1Q9D1H0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rita1Q9D1H0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rita1Q9D1H0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rita1Q9D1H0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rita1Q9D1H0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms