Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Mir8117-201ENSMUST00000184773 107 ntBASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 Gm45453-201ENSMUST00000211758 853 ntBASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 Mir497b-201ENSMUST00000093601 125 ntBASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Chaf1bQ9D0N7 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Gm6443-201ENSMUST00000203599 874 ntBASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Chaf1bQ9D0N7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chaf1bQ9D0N7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chaf1bQ9D0N7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chaf1bQ9D0N7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Gm1401-201ENSMUST00000122048 772 ntBASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Gm44719-201ENSMUST00000206404 149 ntBASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms