Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Gm11025-201ENSMUST00000140773 466 ntBASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Gm38225-201ENSMUST00000194001 393 ntBASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Gm18195-201ENSMUST00000207604 706 ntBASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Chd1lQ9CXF7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chd1lQ9CXF7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Gm13015-201ENSMUST00000118674 204 ntBASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Gm5364-201ENSMUST00000216789 889 ntBASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.2■□□□□ 0.02
Chd1lQ9CXF7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Gm18057-201ENSMUST00000208220 503 ntBASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Chd1lQ9CXF7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd1lQ9CXF7 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd1lQ9CXF7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd1lQ9CXF7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd1lQ9CXF7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.18■□□□□ 0.02
Chd1lQ9CXF7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd1lQ9CXF7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chd1lQ9CXF7 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd1lQ9CXF7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd1lQ9CXF7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chd1lQ9CXF7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd1lQ9CXF7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd1lQ9CXF7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd1lQ9CXF7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd1lQ9CXF7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Chd1lQ9CXF7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms