Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ska1Q9CPV1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ska1Q9CPV1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ska1Q9CPV1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.77□□□□□ -0.37
Ska1Q9CPV1 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ska1Q9CPV1 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ska1Q9CPV1 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ska1Q9CPV1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ska1Q9CPV1 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ska1Q9CPV1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Ska1Q9CPV1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ska1Q9CPV1 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ska1Q9CPV1 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ska1Q9CPV1 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ska1Q9CPV1 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ska1Q9CPV1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.76□□□□□ -0.37
Ska1Q9CPV1 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska1Q9CPV1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Gm6736-201ENSMUST00000166583 948 ntBASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Gm18766-201ENSMUST00000189811 808 ntBASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ska1Q9CPV1 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms