Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Gm11779-201ENSMUST00000118541 368 ntBASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Gm18057-201ENSMUST00000208220 503 ntBASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Gm20553-201ENSMUST00000204205 844 ntBASIC12.15□□□□□ -0.46
Krt88Q9CPR6 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Krt88Q9CPR6 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Krt88Q9CPR6 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Krt88Q9CPR6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Krt88Q9CPR6 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Krt88Q9CPR6 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms