Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.2□□□□□ -0.3
Trim16Q99PP9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Gm12585-201ENSMUST00000117307 290 ntBASIC13.2□□□□□ -0.3
Trim16Q99PP9 Gm14719-201ENSMUST00000121891 340 ntBASIC13.2□□□□□ -0.3
Trim16Q99PP9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.2□□□□□ -0.3
Trim16Q99PP9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.2□□□□□ -0.3
Trim16Q99PP9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim16Q99PP9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim16Q99PP9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Gm14057-201ENSMUST00000120631 482 ntBASIC13.19□□□□□ -0.3
Trim16Q99PP9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trim16Q99PP9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Gm27838-201ENSMUST00000184829 128 ntBASIC13.19□□□□□ -0.3
Trim16Q99PP9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.19□□□□□ -0.3
Trim16Q99PP9 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.19□□□□□ -0.3
Trim16Q99PP9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.19□□□□□ -0.3
Trim16Q99PP9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim16Q99PP9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.18□□□□□ -0.3
Trim16Q99PP9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms