Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 Gm13836-201ENSMUST00000121159 501 ntBASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.73□□□□□ -0.05
Gtf2a1Q99PM3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Gm7642-201ENSMUST00000216345 1809 ntBASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Timm23-208ENSMUST00000226683 750 ntBASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Gm37613-201ENSMUST00000195677 3580 ntBASIC14.72□□□□□ -0.05
Gtf2a1Q99PM3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gtf2a1Q99PM3 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC14.71□□□□□ -0.06
Gtf2a1Q99PM3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Gtf2a1Q99PM3 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Gtf2a1Q99PM3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.71□□□□□ -0.06
Gtf2a1Q99PM3 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Gtf2a1Q99PM3 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Gtf2a1Q99PM3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms