Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Gm8325-201ENSMUST00000099086 453 ntBASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cdh23Q99PF4 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cdh23Q99PF4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Gm2445-201ENSMUST00000182798 989 ntBASIC13.39□□□□□ -0.27
Cdh23Q99PF4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Gm11340-201ENSMUST00000119226 412 ntBASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.39□□□□□ -0.27
Cdh23Q99PF4 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Cdh23Q99PF4 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Gm44552-201ENSMUST00000205458 1247 ntBASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh23Q99PF4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Gm25880-201ENSMUST00000104331 132 ntBASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Gm12266-201ENSMUST00000120311 962 ntBASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Gm12899-201ENSMUST00000120565 551 ntBASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.37□□□□□ -0.27
Cdh23Q99PF4 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh23Q99PF4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Gm19287-201ENSMUST00000203190 358 ntBASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms