Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.65□□□□□ -0.22
Cttnbp2nlQ99LJ0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cttnbp2nlQ99LJ0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cttnbp2nlQ99LJ0 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cttnbp2nlQ99LJ0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cttnbp2nlQ99LJ0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cttnbp2nlQ99LJ0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gm45612-201ENSMUST00000211320 160 ntBASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.64□□□□□ -0.23
Cttnbp2nlQ99LJ0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gm11779-201ENSMUST00000118541 368 ntBASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gm15467-201ENSMUST00000120582 445 ntBASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gm11745-201ENSMUST00000121669 448 ntBASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Rprl2-201ENSMUST00000157150 290 ntBASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Pck2-205ENSMUST00000226352 2784 ntBASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cttnbp2nlQ99LJ0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gm18049-201ENSMUST00000208909 581 ntBASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.62□□□□□ -0.23
Cttnbp2nlQ99LJ0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms