Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC16.55■□□□□ 0.24
RtcbQ99LF4 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Gm8176-201ENSMUST00000191297 1099 ntBASIC16.55■□□□□ 0.24
RtcbQ99LF4 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RtcbQ99LF4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RtcbQ99LF4 B9d1os-201ENSMUST00000137010 674 ntBASIC16.54■□□□□ 0.24
RtcbQ99LF4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Gm17208-201ENSMUST00000168388 535 ntBASIC16.54■□□□□ 0.24
RtcbQ99LF4 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RtcbQ99LF4 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.54■□□□□ 0.24
RtcbQ99LF4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RtcbQ99LF4 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RtcbQ99LF4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.53■□□□□ 0.24
RtcbQ99LF4 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Gm4909-201ENSMUST00000118749 794 ntBASIC16.53■□□□□ 0.24
RtcbQ99LF4 Gm12502-201ENSMUST00000120197 444 ntBASIC16.53■□□□□ 0.24
RtcbQ99LF4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Mir5120-201ENSMUST00000175020 78 ntBASIC16.53■□□□□ 0.24
RtcbQ99LF4 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RtcbQ99LF4 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Gm37986-201ENSMUST00000193285 383 ntBASIC16.53■□□□□ 0.24
RtcbQ99LF4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Gm18615-201ENSMUST00000222919 1031 ntBASIC16.53■□□□□ 0.24
RtcbQ99LF4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RtcbQ99LF4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RtcbQ99LF4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.52■□□□□ 0.24
RtcbQ99LF4 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RtcbQ99LF4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RtcbQ99LF4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RtcbQ99LF4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.52■□□□□ 0.24
RtcbQ99LF4 Gm8862-201ENSMUST00000198379 1346 ntBASIC16.52■□□□□ 0.24
RtcbQ99LF4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RtcbQ99LF4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RtcbQ99LF4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RtcbQ99LF4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms