Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Gm22323-201ENSMUST00000103832 109 ntBASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Gm24255-201ENSMUST00000104481 128 ntBASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Gm25261-201ENSMUST00000157416 134 ntBASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Gm29741-201ENSMUST00000192667 421 ntBASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf1Q99LC2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.46□□□□□ -0.25
Cstf1Q99LC2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Gm12176-201ENSMUST00000121420 875 ntBASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Gm37497-201ENSMUST00000195830 798 ntBASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.46□□□□□ -0.25
Cstf1Q99LC2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cstf1Q99LC2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Cstf1Q99LC2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.46□□□□□ -0.26
Cstf1Q99LC2 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.46□□□□□ -0.26
Cstf1Q99LC2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cstf1Q99LC2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.46□□□□□ -0.26
Cstf1Q99LC2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
Cstf1Q99LC2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.46□□□□□ -0.26
Cstf1Q99LC2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Gm25668-201ENSMUST00000157700 129 ntBASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Gm37489-201ENSMUST00000191883 159 ntBASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Gm6621-201ENSMUST00000193251 772 ntBASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Gm37922-201ENSMUST00000195596 455 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms