Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Usp11Q99K46 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Usp11Q99K46 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.23□□□□□ -0.13
Usp11Q99K46 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Usp11Q99K46 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Gm21470-201ENSMUST00000187680 696 ntBASIC14.23□□□□□ -0.13
Usp11Q99K46 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.23□□□□□ -0.13
Usp11Q99K46 Gm18027-201ENSMUST00000218947 619 ntBASIC14.23□□□□□ -0.13
Usp11Q99K46 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Usp11Q99K46 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Usp11Q99K46 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Usp11Q99K46 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp11Q99K46 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Usp11Q99K46 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Usp11Q99K46 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Usp11Q99K46 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Usp11Q99K46 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp11Q99K46 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Usp11Q99K46 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Usp11Q99K46 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Usp11Q99K46 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp11Q99K46 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp11Q99K46 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.21□□□□□ -0.13
Usp11Q99K46 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp11Q99K46 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Usp11Q99K46 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Usp11Q99K46 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp11Q99K46 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp11Q99K46 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp11Q99K46 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp11Q99K46 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Usp11Q99K46 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp11Q99K46 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp11Q99K46 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Usp11Q99K46 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp11Q99K46 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp11Q99K46 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.21□□□□□ -0.13
Usp11Q99K46 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.21□□□□□ -0.13
Usp11Q99K46 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Usp11Q99K46 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp11Q99K46 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp11Q99K46 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp11Q99K46 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp11Q99K46 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp11Q99K46 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Usp11Q99K46 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp11Q99K46 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Usp11Q99K46 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp11Q99K46 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp11Q99K46 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Usp11Q99K46 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Usp11Q99K46 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms