Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thumpd1Q99J36 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thumpd1Q99J36 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Thumpd1Q99J36 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thumpd1Q99J36 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Thumpd1Q99J36 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thumpd1Q99J36 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Gm33320-201ENSMUST00000192232 530 ntBASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Dupd1-202ENSMUST00000224735 548 ntBASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd1Q99J36 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Gm25287-201ENSMUST00000103846 110 ntBASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Gm22918-201ENSMUST00000103855 110 ntBASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Gm1401-201ENSMUST00000122048 772 ntBASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Gm8927-201ENSMUST00000181978 981 ntBASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Gm21470-201ENSMUST00000187680 696 ntBASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.01□□□□□ -0.49
Thumpd1Q99J36 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Gm3222-201ENSMUST00000071282 990 ntBASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd1Q99J36 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Thumpd1Q99J36 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms