Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb1Q91Y08 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb1Q91Y08 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb1Q91Y08 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb1Q91Y08 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.02□□□□□ -0.16
Pcdhb1Q91Y08 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb1Q91Y08 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhb1Q91Y08 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhb1Q91Y08 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb1Q91Y08 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.02□□□□□ -0.16
Pcdhb1Q91Y08 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb1Q91Y08 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb1Q91Y08 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb1Q91Y08 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb1Q91Y08 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 Gm38144-201ENSMUST00000192790 465 ntBASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb1Q91Y08 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Gm7730-201ENSMUST00000212486 454 ntBASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb1Q91Y08 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Gm6218-201ENSMUST00000219812 628 ntBASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Gm19220-201ENSMUST00000222682 803 ntBASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb1Q91Y08 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb1Q91Y08 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb1Q91Y08 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb1Q91Y08 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb1Q91Y08 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb1Q91Y08 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb1Q91Y08 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms