Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb6Q91XZ4 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb6Q91XZ4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb6Q91XZ4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Acot6-202ENSMUST00000222921 3622 ntBASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Gm7488-201ENSMUST00000117148 684 ntBASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Gm12341-201ENSMUST00000119724 503 ntBASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Gm2423-201ENSMUST00000074863 733 ntBASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb6Q91XZ4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhb6Q91XZ4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhb6Q91XZ4 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhb6Q91XZ4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Pcdhb6Q91XZ4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhb6Q91XZ4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Mir7221-201ENSMUST00000184009 72 ntBASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Mir6977-201ENSMUST00000184960 64 ntBASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Gm29608-201ENSMUST00000190444 463 ntBASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Gm10576-201ENSMUST00000191927 825 ntBASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb6Q91XZ4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb6Q91XZ4 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb6Q91XZ4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb6Q91XZ4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb6Q91XZ4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb6Q91XZ4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb6Q91XZ4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb6Q91XZ4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb6Q91XZ4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb6Q91XZ4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms