Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Gm11637-201ENSMUST00000120601 592 ntBASIC14.34□□□□□ -0.11
TraipQ8VIG6 Gm2231-201ENSMUST00000125661 612 ntBASIC14.34□□□□□ -0.11
TraipQ8VIG6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.34□□□□□ -0.11
TraipQ8VIG6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Gm42693-201ENSMUST00000196779 631 ntBASIC14.34□□□□□ -0.11
TraipQ8VIG6 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Gm19309-201ENSMUST00000218295 205 ntBASIC14.34□□□□□ -0.11
TraipQ8VIG6 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.34□□□□□ -0.11
TraipQ8VIG6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.34□□□□□ -0.11
TraipQ8VIG6 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TraipQ8VIG6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TraipQ8VIG6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TraipQ8VIG6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
TraipQ8VIG6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.33□□□□□ -0.11
TraipQ8VIG6 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.33□□□□□ -0.11
TraipQ8VIG6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TraipQ8VIG6 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Gm13183-201ENSMUST00000118615 789 ntBASIC14.33□□□□□ -0.12
TraipQ8VIG6 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.33□□□□□ -0.12
TraipQ8VIG6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.33□□□□□ -0.12
TraipQ8VIG6 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.33□□□□□ -0.12
TraipQ8VIG6 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.33□□□□□ -0.12
TraipQ8VIG6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.33□□□□□ -0.12
TraipQ8VIG6 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TraipQ8VIG6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.32□□□□□ -0.12
TraipQ8VIG6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms