Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 AA619741-201ENSMUST00000195095 646 ntBASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Mir8117-201ENSMUST00000184773 107 ntBASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpa1Q8VEE4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rpa1Q8VEE4 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rpa1Q8VEE4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Rpa1Q8VEE4 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.58□□□□□ -0.23
Rpa1Q8VEE4 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.58□□□□□ -0.23
Rpa1Q8VEE4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.58□□□□□ -0.23
Rpa1Q8VEE4 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rpa1Q8VEE4 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rpa1Q8VEE4 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Gm12260-201ENSMUST00000122447 411 ntBASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Gm22119-201ENSMUST00000175594 99 ntBASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Gm44492-201ENSMUST00000197012 141 ntBASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 AW822252-206ENSMUST00000208904 237 ntBASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms