Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd2Q8VE28 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd2Q8VE28 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd2Q8VE28 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd2Q8VE28 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd2Q8VE28 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd2Q8VE28 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nkd2Q8VE28 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nkd2Q8VE28 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd2Q8VE28 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.34□□□□□ -0.43
Nkd2Q8VE28 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Nkd2Q8VE28 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd2Q8VE28 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd2Q8VE28 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd2Q8VE28 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.34□□□□□ -0.43
Nkd2Q8VE28 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Nkd2Q8VE28 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nkd2Q8VE28 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nkd2Q8VE28 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nkd2Q8VE28 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.33□□□□□ -0.44
Nkd2Q8VE28 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.33□□□□□ -0.44
Nkd2Q8VE28 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nkd2Q8VE28 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkd2Q8VE28 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nkd2Q8VE28 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd2Q8VE28 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd2Q8VE28 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms