Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps39Q8R5L3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vps39Q8R5L3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.52□□□□□ -0.24
Vps39Q8R5L3 Gm4875-201ENSMUST00000118257 786 ntBASIC13.52□□□□□ -0.25
Vps39Q8R5L3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps39Q8R5L3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps39Q8R5L3 Gm9063-201ENSMUST00000223299 582 ntBASIC13.52□□□□□ -0.25
Vps39Q8R5L3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps39Q8R5L3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps39Q8R5L3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps39Q8R5L3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps39Q8R5L3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps39Q8R5L3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.52□□□□□ -0.25
Vps39Q8R5L3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps39Q8R5L3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Vps39Q8R5L3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps39Q8R5L3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps39Q8R5L3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps39Q8R5L3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps39Q8R5L3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps39Q8R5L3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps39Q8R5L3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps39Q8R5L3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Gm15240-201ENSMUST00000118156 720 ntBASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Gm7775-201ENSMUST00000218871 853 ntBASIC13.51□□□□□ -0.25
Vps39Q8R5L3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps39Q8R5L3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.5□□□□□ -0.25
Vps39Q8R5L3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Gm13223-201ENSMUST00000118609 747 ntBASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms