Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup35Q8R4R6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Nup35Q8R4R6 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nup35Q8R4R6 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nup35Q8R4R6 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
Nup35Q8R4R6 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup35Q8R4R6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nup35Q8R4R6 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Nup35Q8R4R6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nup35Q8R4R6 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup35Q8R4R6 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup35Q8R4R6 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup35Q8R4R6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nup35Q8R4R6 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Nup35Q8R4R6 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11□□□□□ -0.65
Nup35Q8R4R6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup35Q8R4R6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup35Q8R4R6 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Rprl2-201ENSMUST00000157150 290 ntBASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Gm18733-201ENSMUST00000173950 856 ntBASIC10.99□□□□□ -0.65
Nup35Q8R4R6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup35Q8R4R6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Gm5566-201ENSMUST00000116118 459 ntBASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Gm9719-201ENSMUST00000162765 543 ntBASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.98□□□□□ -0.65
Nup35Q8R4R6 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms