Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Gm27628-201ENSMUST00000184911 107 ntBASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm29310-201ENSMUST00000185468 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm21825-201ENSMUST00000185728 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm29109-201ENSMUST00000185895 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm21896-201ENSMUST00000186520 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm21873-201ENSMUST00000186728 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm21794-201ENSMUST00000187056 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm21880-201ENSMUST00000187275 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm21826-201ENSMUST00000187451 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm21198-201ENSMUST00000188393 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm21749-201ENSMUST00000189343 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm21901-201ENSMUST00000189568 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm29424-201ENSMUST00000189716 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm28599-201ENSMUST00000189838 694 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm21867-201ENSMUST00000189917 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm29269-201ENSMUST00000190087 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm21722-201ENSMUST00000190153 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm28423-201ENSMUST00000190701 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm21899-201ENSMUST00000190745 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm21910-201ENSMUST00000191163 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm21849-201ENSMUST00000191571 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm28678-201ENSMUST00000191593 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm20910-201ENSMUST00000193268 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm21871-201ENSMUST00000194621 696 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm5864-201ENSMUST00000202263 970 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm6443-201ENSMUST00000203599 874 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf4Q8K4J2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms