Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Gm5354-201ENSMUST00000182417 973 ntBASIC12.73□□□□□ -0.37
Clrn1Q8K445 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.72□□□□□ -0.37
Clrn1Q8K445 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.72□□□□□ -0.37
Clrn1Q8K445 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.72□□□□□ -0.37
Clrn1Q8K445 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Clrn1Q8K445 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.72□□□□□ -0.37
Clrn1Q8K445 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.72□□□□□ -0.37
Clrn1Q8K445 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.72□□□□□ -0.37
Clrn1Q8K445 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.72□□□□□ -0.37
Clrn1Q8K445 Gm19220-201ENSMUST00000222682 803 ntBASIC12.72□□□□□ -0.37
Clrn1Q8K445 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.72□□□□□ -0.37
Clrn1Q8K445 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.72□□□□□ -0.37
Clrn1Q8K445 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn1Q8K445 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Gm7488-201ENSMUST00000117148 684 ntBASIC12.71□□□□□ -0.37
Clrn1Q8K445 Gm11524-201ENSMUST00000119349 807 ntBASIC12.71□□□□□ -0.37
Clrn1Q8K445 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.71□□□□□ -0.37
Clrn1Q8K445 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Gm25925-201ENSMUST00000158314 306 ntBASIC12.71□□□□□ -0.37
Clrn1Q8K445 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Gm19078-201ENSMUST00000206311 727 ntBASIC12.71□□□□□ -0.37
Clrn1Q8K445 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms