Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Gm38144-201ENSMUST00000192790 465 ntBASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Gm42550-201ENSMUST00000201553 960 ntBASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.57■□□□□ 0.08
Rtn1Q8K0T0 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Gm15678-201ENSMUST00000117573 960 ntBASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn1Q8K0T0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Gm14928-201ENSMUST00000120198 477 ntBASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Gm38223-201ENSMUST00000194484 695 ntBASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Gm18018-201ENSMUST00000198273 408 ntBASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn1Q8K0T0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rtn1Q8K0T0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rtn1Q8K0T0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rtn1Q8K0T0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rtn1Q8K0T0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rtn1Q8K0T0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms