Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Mir698-201ENSMUST00000102164 109 ntBASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28bQ8CEG5 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Gm27631-201ENSMUST00000184163 466 ntBASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Mir125a-201ENSMUST00000083545 68 ntBASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28bQ8CEG5 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms