Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Gm14767-201ENSMUST00000121559 586 ntBASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Mir497b-201ENSMUST00000093601 125 ntBASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc87Q8CDL9 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc87Q8CDL9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Gm44344-201ENSMUST00000200287 129 ntBASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms