Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Shisa4Q8CA71 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Shisa4Q8CA71 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.58■□□□□ 0.09
Shisa4Q8CA71 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Shisa4Q8CA71 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Shisa4Q8CA71 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Shisa4Q8CA71 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Gm8062-201ENSMUST00000139696 444 ntBASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Gm44069-201ENSMUST00000204898 506 ntBASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.58■□□□□ 0.08
Shisa4Q8CA71 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.58■□□□□ 0.08
Shisa4Q8CA71 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.58■□□□□ 0.08
Shisa4Q8CA71 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.58■□□□□ 0.08
Shisa4Q8CA71 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shisa4Q8CA71 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Gm12203-201ENSMUST00000118235 598 ntBASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Gm12209-201ENSMUST00000120089 596 ntBASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Gm13123-201ENSMUST00000122173 492 ntBASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Gm29127-201ENSMUST00000188304 517 ntBASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Gm37424-201ENSMUST00000191727 561 ntBASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shisa4Q8CA71 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Gm8213-201ENSMUST00000118191 441 ntBASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Snora78-201ENSMUST00000158630 128 ntBASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Gm17420-201ENSMUST00000164753 153 ntBASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Mir7221-201ENSMUST00000184009 72 ntBASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms