Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col6a6Q8C6K9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.15□□□□□ -0.47
Col6a6Q8C6K9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col6a6Q8C6K9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Col6a6Q8C6K9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Col6a6Q8C6K9 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
Col6a6Q8C6K9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col6a6Q8C6K9 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Col6a6Q8C6K9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Col6a6Q8C6K9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col6a6Q8C6K9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Col6a6Q8C6K9 Gm24255-201ENSMUST00000104481 128 ntBASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Gm22902-201ENSMUST00000158488 302 ntBASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Gm21769-201ENSMUST00000211922 111 ntBASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Gm25668-201ENSMUST00000157700 129 ntBASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Gm37489-201ENSMUST00000191883 159 ntBASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a6Q8C6K9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Gm11591-201ENSMUST00000120063 702 ntBASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Gm11439-201ENSMUST00000118598 409 ntBASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms