Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Gm17837-201ENSMUST00000186435 985 ntBASIC12.06□□□□□ -0.48
Rft1Q8C3B8 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rft1Q8C3B8 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.05□□□□□ -0.48
Rft1Q8C3B8 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rft1Q8C3B8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Gm6222-201ENSMUST00000120787 396 ntBASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Mir7023-201ENSMUST00000185093 64 ntBASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms