Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps9d1Q8C190 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps9d1Q8C190 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps9d1Q8C190 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps9d1Q8C190 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Vps9d1Q8C190 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Gm9719-201ENSMUST00000162765 543 ntBASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Vps9d1Q8C190 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Gm27622-201ENSMUST00000183779 60 ntBASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.63□□□□□ -0.39
Vps9d1Q8C190 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms