Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Gm37714-201ENSMUST00000194742 342 ntBASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Gm38273-201ENSMUST00000194987 2382 ntBASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Syt7-204ENSMUST00000223586 1344 ntBASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trerf1Q8BXJ2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trerf1Q8BXJ2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trerf1Q8BXJ2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trerf1Q8BXJ2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
Trerf1Q8BXJ2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.27□□□□□ -0.12
Trerf1Q8BXJ2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.27□□□□□ -0.12
Trerf1Q8BXJ2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trerf1Q8BXJ2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trerf1Q8BXJ2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trerf1Q8BXJ2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trerf1Q8BXJ2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
Trerf1Q8BXJ2 Pck2-205ENSMUST00000226352 2784 ntBASIC14.27□□□□□ -0.12
Trerf1Q8BXJ2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Trerf1Q8BXJ2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trerf1Q8BXJ2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trerf1Q8BXJ2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trerf1Q8BXJ2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.26□□□□□ -0.13
Trerf1Q8BXJ2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trerf1Q8BXJ2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trerf1Q8BXJ2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trerf1Q8BXJ2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trerf1Q8BXJ2 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.26□□□□□ -0.13
Trerf1Q8BXJ2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trerf1Q8BXJ2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trerf1Q8BXJ2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.26□□□□□ -0.13
Trerf1Q8BXJ2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms