Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Usp40Q8BWR4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC18.39■□□□□ 0.53
Usp40Q8BWR4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp40Q8BWR4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp40Q8BWR4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp40Q8BWR4 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp40Q8BWR4 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp40Q8BWR4 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.39■□□□□ 0.53
Usp40Q8BWR4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp40Q8BWR4 Tmed9-203ENSMUST00000224741 1450 ntBASIC18.39■□□□□ 0.53
Usp40Q8BWR4 AC153366.2-201ENSMUST00000219461 1984 ntBASIC18.39■□□□□ 0.53
Usp40Q8BWR4 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp40Q8BWR4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Gm11658-201ENSMUST00000120913 1008 ntBASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Gm11978-201ENSMUST00000122315 466 ntBASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Gm16379-201ENSMUST00000161469 348 ntBASIC18.38■□□□□ 0.53
Usp40Q8BWR4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Gm2467-201ENSMUST00000182266 1010 ntBASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Gm6981-201ENSMUST00000182467 1008 ntBASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Gm8762-201ENSMUST00000193486 339 ntBASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Olfr284-202ENSMUST00000206647 966 ntBASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Gm9257-201ENSMUST00000221254 232 ntBASIC18.38■□□□□ 0.53
Usp40Q8BWR4 AC022775.2-201ENSMUST00000227885 646 ntBASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Gm38049-201ENSMUST00000195698 1372 ntBASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp40Q8BWR4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC18.37■□□□□ 0.53
Usp40Q8BWR4 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Gm44985-201ENSMUST00000206202 1016 ntBASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp40Q8BWR4 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Gm18935-201ENSMUST00000212692 664 ntBASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Gm19163-201ENSMUST00000223313 780 ntBASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp40Q8BWR4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Usp40Q8BWR4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp40Q8BWR4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms