Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.79□□□□□ -0.2
Nup54Q8BTS4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup54Q8BTS4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nup54Q8BTS4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.77□□□□□ -0.2
Nup54Q8BTS4 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nup54Q8BTS4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nup54Q8BTS4 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nup54Q8BTS4 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.77□□□□□ -0.21
Nup54Q8BTS4 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.77□□□□□ -0.21
Nup54Q8BTS4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Gm10012-201ENSMUST00000078252 192 ntBASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms