Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Gm17837-201ENSMUST00000186435 985 ntBASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Gm6888-201ENSMUST00000221983 706 ntBASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cpne3Q8BT60 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Gm13385-201ENSMUST00000121089 220 ntBASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Gm4804-201ENSMUST00000182234 999 ntBASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Gm27618-201ENSMUST00000183671 60 ntBASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne3Q8BT60 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne3Q8BT60 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpne3Q8BT60 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cpne3Q8BT60 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cpne3Q8BT60 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cpne3Q8BT60 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpne3Q8BT60 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cpne3Q8BT60 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.02□□□□□ -0.32
Cpne3Q8BT60 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 277.6 ms