Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Gm18054-201ENSMUST00000207539 555 ntBASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scfd1Q8BRF7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.33■□□□□ 0.05
Scfd1Q8BRF7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scfd1Q8BRF7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Scfd1Q8BRF7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scfd1Q8BRF7 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scfd1Q8BRF7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Scfd1Q8BRF7 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Gm45880-201ENSMUST00000213041 853 ntBASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scfd1Q8BRF7 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Mir686-201ENSMUST00000102174 109 ntBASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Mir6420-201ENSMUST00000185032 102 ntBASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Gm37008-201ENSMUST00000195712 319 ntBASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms